Difference between revisions of "Agenda"
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*Fall schedule (any trips planned) | *Fall schedule (any trips planned) | ||
*Travel, Sept. 20-27, Hydrocephalus Society, Kobe, Japan | *Travel, Sept. 20-27, Hydrocephalus Society, Kobe, Japan | ||
+ | *Travel, Oct. 5, VR bash, Boise, ID | ||
*Travel, Oct. 11-14, BMES meeting | *Travel, Oct. 11-14, BMES meeting | ||
*Travel, Oct. 18-20, INBRE conference, Wyoming | *Travel, Oct. 18-20, INBRE conference, Wyoming |
Revision as of 23:22, 7 September 2017
Contents
July 6, 2017
Research impact
- Brady Lawrence, 2 papers submitted
- Lucas Sass, 1 paper submitted
- Gabryel Conley, INBRE 2nd place poster competition / student choice
- Brian Aldrimk, ??? SURF thing...
- Kyle McCain, INBRE 3rd place, HS transition trainee /
Misc. items
- Fall schedule (any trips planned)
- Travel, Sept. 20-27, Hydrocephalus Society, Kobe, Japan
- Travel, Oct. 5, VR bash, Boise, ID
- Travel, Oct. 11-14, BMES meeting
- Travel, Oct. 18-20, INBRE conference, Wyoming
- Travel, October 25-28, ASGSR [1]
- Trave, Nov 11-12, Arizona, Neurosurgery
Grants and grant opportunities
- Check travel grants for conferences
- https://www.uidaho.edu/research/students/undergraduate-research/getting-started/research-grants-program
- Student awards http://www.uidaho.edu/current-students/student-involvement/leadership/student-achievement
- NSF GRFP course
Project updates
NASA Eye Biomechanics
- Jesse (Optic nerve trajectory / reliability) – 4 operators, 5x?
- Austin (3D ONS) - starting to write paper on methods
- Abstracts submitted for ASGSR meeting Seattle!
CFD CSF biomechanics
- Mohammadreza (CFD) - Working on Human full-spine model paper / NHP flow paper
- Dr. Yuan Wu (contrast enhance MRI) - get results for all NHPs
Neurochi
- Claire (in vitro model) - entire model prototype together (we need it!) , Sept 28-29 experiments at Berkeley
- Gabryel (3D brain) - working of full brain model
- Brian (3D cortical SAS) - working on it (done by end of July)
- Senior design pump team: working on new pump design
Neuroculus
- Brian (software): new interactive model w/Oculus VR
- Lucas / Austin: full brick of MRI Data
- Joe: new interface with full brain and spine!!!
ALS MRI Biomarkers
- Lucas (patient enrollment / MRI scheduling): 7 patients scanned, 10 controls, following up on all
- Kyle / Tavara (quantification of CSF geometry and flow): analysis done for 3 patients and 3 controls?
CNS tissue motion (MSRTP)
- Braden: paper on brain motion in CM drafted
Arachnoid trabeculae
- Biomechanical / biochemical characterization: obtained first brain model
- Dr. Schiele constructing bi-axial tester
- Reza (FEA modeling): need to make prototype model
Neurotouch
- on hold, need economic analysis
July 6, 2017
Research impact
- Mohammadreza Khani, 2nd place PhD student paper competition at SB3C!
- Gabryel Conley, UG student paper competition finalist
- Channel 2 news on NASA ISGC project
Misc. items
- Summer schedule (any trips planned)
- Travel, June 20-23, ASAP Long Island Meeting
- Travel, JUne 26-27, Idaho UG research conference
- Travel, July 31 - Aug 2, INBRE Moscow, ID
- Travel, Aug 15-17, Atlanta NASA project meeting
- Travel, Sept. 20-27, Hydrocephalus Society, Kobe, Japan
- Travel, Oct. 11-14, BMES meeting
- Travel, Oct. 18-20, INBRE conference, Wyoming
- Travel, October 25-28, ASGSR [2]
- Trave, Nov 11-12, Arizona, Neurosurgery
Grants and grant opportunities
- Check travel grants for conferences
- https://www.uidaho.edu/research/students/undergraduate-research/getting-started/research-grants-program
- Student awards http://www.uidaho.edu/current-students/student-involvement/leadership/student-achievement
- NSF GRFP course
Project updates
NASA Eye Biomechanics
- Jesse (Optic nerve trajectory / reliability) – 4 operators, 5x?
- Austin (3D ONS) - starting to write paper on methods
- Abstracts submitted for ASGSR meeting Seattle!
CFD CSF biomechanics
- Mohammadreza (CFD) - Working on Human full-spine model paper / NHP flow paper
- Dr. Yuan Wu (contrast enhance MRI) - get results for all NHPs
Neurochi
- Claire (in vitro model) - entire model prototype together (we need it!) , Sept 28-29 experiments at Berkeley
- Gabryel (3D brain) - working of full brain model
- Brian (3D cortical SAS) - working on it (done by end of July)
- Senior design pump team: working on new pump design
Neuroculus
- Brian (software): new interactive model w/Oculus VR
- Lucas / Austin: full brick of MRI Data
- Joe: new interface with full brain and spine!!!
ALS MRI Biomarkers
- Lucas (patient enrollment / MRI scheduling): 7 patients scanned, 10 controls, following up on all
- Kyle / Tavara (quantification of CSF geometry and flow): analysis done for 3 patients and 3 controls?
CNS tissue motion (MSRTP)
- Braden: paper on brain motion in CM drafted
Arachnoid trabeculae
- Biomechanical / biochemical characterization: obtained first brain model
- Dr. Schiele constructing bi-axial tester
- Reza (FEA modeling): need to make prototype model
Neurotouch
- on hold, need economic analysis
June 1, 2017
Research impact
Misc. items
- Summer schedule
- Dr. Schiele BE 504/404 Biomech of hard and soft tissues
- ASGSR seattle conference, October 25-28 [5]
- 350 words / Austin and Jesse abstracts
Grants and grant opportunities
- Check travel grants for conferences
- https://www.uidaho.edu/research/students/undergraduate-research/getting-started/research-grants-program
- Student awards http://www.uidaho.edu/current-students/student-involvement/leadership/student-achievement
Project updates
NASA Eye Biomechanics
- Jesse (Optic nerve trajectory / reliability) – training Archana / getting a lot more data from NASA
- Austin (3D ONS) - abstract for seattle space meeting... / also NASA twin study results...
CFD CSF biomechanics
- Mohammadreza (CFD) - Great new results for entire new model!
- Dr. Yuan Wu (contrast enhance MRI) - get results for all NHPs
Neurochi
- Lucas (in vitro model) - entire model prototype together (we need it!)
- Gabryel (3D brain) - get all together spine / brain / ventricles...do research on anatomy...
- Claire (CSF pump) / Brian (CSF pump): finish prototype pump / start prototype model
Neuroculus
- [6] running
- Brian (software): email entire prototype
- Lucas (model creation): done
- Gabryel (model creation): brain w/ ALS study geometry
- Joe: making interface
ALS MRI Biomarkers
- Lucas (patient enrollment / MRI scheduling): 2 patients scanned?
- Kyle / Tavara (quantification of CSF geometry and flow): get analysis done for subject 1
CNS tissue motion (MSRTP)
- Braden: start background lit review / send citi training
Arachnoid trabeculae
- Biomechanical / biochemical characterization: obtained first brain model
- Dr. Schiele constructing bi-axial tester
- Gabryel help with tissue analysis
- Reza (FEA modeling): need to make prototype model
Neurotouch
- on hold, need economic analysis
May 5, 2017
Research impact
- Article on Christina Gibbs [7]
- 3rd place Innovation Showcase UI, Neurotouch Team [8]
- Mohammadreza Khani paper in JBME!
Misc. items
- Summer schedule
- Dr. Schiele BE 504/404 Biomech of hard and soft tissues
- Information for New NIML Student Researchers
- Bryn new baby girl! Rose Cordelia Martin
- International Hydrocephalus Conference Abstracts: May 15
- 250 words Are Monkeys Like Humans?: Comparison of intrathecal CSF dynamics across large mammalian species
- 250 words Neurochi: A virtual reality model of the intrathecal and intracranial cerebrospinal fluid system
Grants and grant opportunities
- OUR SURF grant - Brian Aldrmik $4000 / $1000 equipment
- NASA ISGC - Austin Sass $2500
- INBRE - Gabriel Conley $6000?
- INBRE - Kyle McCain $? HS summer fellow
- NIH INBRE - Bryn Martin, $140k project for TBI
- https://www.uidaho.edu/research/students/undergraduate-research/getting-started/research-grants-program
- Student awards http://www.uidaho.edu/current-students/student-involvement/leadership/student-achievement
Project updates
NASA Eye Biomechanics
- Jesse (Optic nerve trajectory / reliability) – show results and train 1 more student
- Austin (3D ONS) - abstract for seattle space meeting... / also NASA twin study results...
Hydrodynamic spine
- Mohammadreza (CFD) - do the whole thing! / finish NHP paper on CSF dynamics
- Lucas (in vitro model) - entire model prototype together (we need it!)
- Gabryel (3D brain) - get all together spine / brain / ventricles...do research on anatomy...
- Claire (CSF pump) / Brian (CSF pump): finish prototype pump / start prototype model
- Dr. Yuan Wu (contrast enhance MRI) - get results for all NHPs
Neuroculus
- [9] running
- Brian (software): email entire prototype
- Lucas (model creation): done
- Gabryel (model creation): brain...
ALS MRI Biomarkers
- Lucas (patient enrollment / MRI scheduling): 2 patients scanned?
- Tavara (quantification of CSF geometry and flow): get analysis done for subject 1
- Mohammareza (assistance w/ data): help Tavara with flow assessment
Neurotouch
- To be featured in UIdaho Innovation Showcase, www.uidaho.edu/innovationshowcase
- To be featured on UIdaho facebook and instagram...
CNS tissue motion (MSRTP)
- Braden: start background lit review
Arachnoid trabeculae
- Biomechanical / biochemical characterization: getting BSL2 certification
- Made lab safety manual
- Reza (FEA modeling): need to make prototype model
Visualizing science
- Casey (art) - make the sculpture / exhibit at Pritchard
April 7, 2017
Research impact
- Austin Sass, OUR abstract
- Stuart Sater, OUR abstract
- Brian Aldrimk, OUR abstract
- Bryn Martin, paper published [10]
- Bryn Martin, paper published [11]
- Bryn Martin, abstract submitted, CSF dynamics symposium [12]
- Bryn Martin co-organizer for IHIWG meeting in Long Beach, April 27 and 28, 2017 [13]
Misc. items
- Information for New NIML Student Researchers
- UI interlibrary loan for journal articles [14]
- May 2, 11-12:15 am Gritman MRI tour
- April 11, 11-12:15 UI ISMaRT clinic Ultrasound Demonstration, College of Education 1st floor
- New computers / monitors in common area / Access with UI login
- UG student research symposium, April 24, 11-1:30pm
Grants and grant opportunities
- OUR SURF UG grant $5000, Claire and Brian applied...
- $800 travel grant OUR, check that out
- https://www.uidaho.edu/research/students/undergraduate-research/getting-started/research-grants-program
- Student awards http://www.uidaho.edu/current-students/student-involvement/leadership/student-achievement
- UG research symposium April 3 deadline http://www.uidaho.edu/news/news-articles/my-ui/2017-february/021317-undergraduatesymposium
Project updates
NASA Eye Biomechanics
- Jesse (Optic nerve trajectory / reliability) – show results and train 1 more student
- Austin (3D ONS) - show results with tool
Hydrodynamic spine
- Mohammadreza (CFD) - do the whole thing! / finish NHP paper on CSF dynamics
- Lucas (in vitro model) - entire model prototype together (we need it!)
- Gabryel (3D brain) - get all together spine / brain / ventricles...do research on anatomy...
- Claire (CSF pump) / Brian (CSF pump): finish prototype pump / start prototype model
- Dr. Yuan Wu (contrast enhance MRI) - get results for all NHPs
Neuroculus
- [15] running
- Brian (software): email entire prototype
- Lucas (model creation): done
- Gabryel (model creation): brain...
ALS MRI Biomarkers
- Lucas (patient enrollment / MRI scheduling): 2 patients scanned?
- Tavara (quantification of CSF geometry and flow): get analysis done for subject 1
- Mohammareza (assistance w/ data): help Tavara with flow assessment
Neurotouch
- To be featured in UIdaho Innovation Showcase, www.uidaho.edu/innovationshowcase
- To be featured on UIdaho facebook and instagram...
CNS tissue motion (MSRTP)
- Braden: start background lit review
Arachnoid trabeculae
- Biomechanical / biochemical characterization: getting BSL2 certification
- Made lab safety manual
- Reza (FEA modeling): need to make prototype model
Visualizing science
- Casey (art) - make the sculpture / exhibit at Pritchard
March 3, 2017
Research impact
- Gabryel Conley, SB3C abstract
- Mohammadreza, 1st paper, JBME, accepted with revisions
Misc. items
- Information for New NIML Student Researchers
- Lab pictures needed for everyone…please send or I will put up a random picture for you!
- May 2, 11-12:15 am Gritman MRI tour
- New computers / monitors in common area
Grants and grant opportunities
- Congrats to Idaho INBRE scholars Gabryel Conley $6000
- Congrats to WWAMI MSRTP fellow Braden Lawrence $5000
- NASA UG fellowship Austin Sass Applied, $2500
- OUR SURF UG grant $5000 April 3 deadline
- $800 travel grant
- https://www.uidaho.edu/research/students/undergraduate-research/getting-started/research-grants-program
- Student awards http://www.uidaho.edu/current-students/student-involvement/leadership/student-achievement
- UG research symposium April 3 deadline http://www.uidaho.edu/news/news-articles/my-ui/2017-february/021317-undergraduatesymposium
Project updates
NASA Eye Biomechanics
- Jesse (Optic nerve trajectory / reliability) – show results and train 1 more student
- Austin (3D ONS) - show results with tool
Visualizing science
- Casey (art) - make the sculpture / exhibit at Pritchard
Hydrodynamic spine
- Dr. Yuan Wu (contrast enhance MRI) - get results for all NHPs
- Mohammadreza (CFD) - do the whole thing! / finish NHP paper on CSF dynamics
- Lucas (in vitro model) - entire model prototype together (we need it!)
- Gabryel (3D brain) - get all together spine / brain / ventricles...do research on anatomy...
- Claire (CSF pump) / Brian (CSF pump): finish prototype pump / start prototype model
Neuroculus
- Brian (software): email entire prototype
- Lucas (model creation): done
- Gabryel (model creation): brain...
ALS MRI Biomarkers
- Lucas (patient enrollment / MRI scheduling): 2 patients scanned?
- Tavara (quantification of CSF geometry and flow): get analysis done for subject 1
- Mohammareza (assistance w/ data): help Tavara with flow assessment
Neurotouch
- Christina: making prototype sensor...thursday 4pm, BE lounge design review
CNS tissue motion (MSRTP)
- Braden: start background lit review
Arachnoid trabeculae
- Biomechanical / biochemical characterization? need someone for this...
- Reza (FEA modeling): need to look at initial model
February 3, 2017
Research impact
- Lucas Sass, SB3C abstract
- Mohammadreza, SB3C abstract
- Mohammadreza, 1st paper, JBME, under review
- Neuroculus tm, and domain www.neuroculus.com coming soon…
- Visualizing science opening reception at Pritchard art gallery Feb 10th, 5 pm all invited!!!
Deadlines
- SB3C conference UG abstracts Feb 13?
- May 2, 11-12:15 am Gritman MRI tour
Misc. items
- IRIC access / main / space usage / BEL 218 / safety first
- Lab pictures needed for everyone…please send or I will put up a random picture for you!
Grants and grant opportunities
- Congrats to grand challenges scholars hiring: $2.5k Tavara, $3.5k Gabryel: money for computer??
- NASA grad. student fellowship http://www.idahospacegrant.org/fellowships Feb 13 deadline
- OUR Grants…deadline for summer fellowships
- https://www.uidaho.edu/research/students/undergraduate-research/getting-started/research-grants-program
- $800 travel grant / SURF, $5000 summer research student fellowship
Project updates
NASA Eye Biomechanics
- Jesse (Optic nerve trajectory / reliability) – need two volunteers to train on this…Stu?
- Austin (3D ONS) - normalize data / re-assess...
Visualizing science
- Casey (art) - make the sculpture / exhibit at Pritchard
- Lucas (model) - nothing
Hydrodynamic spine
- Dr. Yuan Wu (contrast enhance MRI) - get results for all NHPs
- Mohammadreza (CFD) - human csf simulation independence study / finish NHP paper on CSF dynamics
- Lucas (in vitro model) - entire model prototype together
- Gabryel (3D brain) - reflect cerebellar cisterns...get all together...
- Claire (CSF pump) / Brian (CSF pump): finish prototype pump / start prototype model
Neuroculus
- Brian (software): email entire prototype
- Lucas (model creation): done
- Gabryel (model creation): brain...
ALS MRI Biomarkers
- Lucas (patient enrollment / MRI scheduling): enroll people / try to find more / let know they get MRIs
- Tavara (quantification of CSF geometry and flow): get analysis done for subject 1
- Mohammareza (assistance w/ data): help Tavara with flow assessment
Neurotouch
- Christina: making prototype sensor...thursday 4pm, BE lounge design review
CNS tissue motion (MSRTP)
- Braden: start background lit review
Arachnoid trabeculae
- Biomechanical / biochemical characterization? need someone for this...
- Reza (FEA modeling): need to look at initial model
December 1st lab meeting
Project reports and goals Gabryel – idealize ventricular brain model / vacation in Peru over December / grand challenges money? Tavara – matlab code to get pulse wave velocity in spine goal run through all data sets / grand challenges money? Lucas – VIP: brain and spine stuff / paper finish with Reza / start by next week on 3D print / make sure model is ready to go… ALS: MRI scan… Jesse – December 12: get parameters and analyze data for ON stuff Austin – do interpolation technique to get contrast at an ON cross-section
November lab meeting
Agenda
- Grand challenges
- OUR Grants…deadline for summer fellowships
- Graduate student grants?
- IRIC January 3, move over there
- Spinaker spiking nneurons…
- BEL 208
- BE404 / 504 Medical Imaging
Projects Undergraduate projects Brain 3D fluid space model generation: Gabryel MRI-biomarkers of Amyotrophic Lateral Sclerosis: Tavara Freeman, Lucas Sass CSF wave propagation velocity: Tavara Freeman, NeuroTouch: Mazen, Christina, Brendan (Bryn explains if other not present) Assessment of optic nerve sheath geometry in astronauts: Austin Sass
Graduate projects Assessment of optic nerve tortuosity in astronauts: Jesse Rohr Numerical modeling of intrathecal drug diffusion: Reza CSF system hydrodynamic simulator (VIP): Lucas CSF system virtual reality simulator: Brian Cleveley (Lucas explains if Brian is not present) Contrast-enhanced MR imaging of cerebrospinal fluid drug spread: Yuan Wang (Bryn explains if Yuan is not present)
July 28, 2016
Attendance
- Rabijit Dutta
- Lucas
- Tavara
- Josh
- Mohammadreza
- Sally
Agenda
- Lab outing? August Monday?
- August 13 last day in lab for summer students
- Register for classes
- Neural Engineering Class BE404
Presentation today: Rabijit Dutta – “Computational Lung and Pulmonary ventilation”
July 14, 2016
Agenda
Students Summer
- Gabryel
- Lucas
- Violet
- Tavara
- Christina
- Josh
www.niml.org webpage updates
Abstracts submitted International Society for Hydrocephalus and CSF Disorders
Papers in progress
- Reza CFD modeling of CSF
- Christina / CSF flow and geometry characterization in primates
Other announcements:
- Grants? – Engineering Grand Challenges
- Summer schedule, ends August 13
- Fall semester BE 404: Biomechanics (Schiele) / Neural Engineering (Martin)
Presentations today:
- M.S. student Lucas Sass, “Progress on building a hydrodynamic simulator for brain therapeutic development”
- B.S. students Violet Gomm and Tavara Freeman, “Waveform analysis of CSF and arterial blood pressures in a rat spinal cord injury model”
Lab outing maybe on Monday… in August…
March 10, 2016
Agenda Internships… ISGC Neuromodulation meeting Las Vegas BMES / ASABE Undergraduate research proposal Project meetings Mohammadreza presentation
February 25, 2016
Agenda Lab outing → Casa Lopez on Monday? BMES / ASABE Undergraduate research proposal NASA Internship Project meetings Mohammadreza presentation
IMPORTANT: The Spring 2016 presentation schedule will be:
Feb 11 Mohammadreza
Feb 25 Amanda / Josh / Christina → 3d slicer / SPM12
Mar 10 Lucas / Marcello
Mar 24 Mohammadreza
Apr 14 Amanda / Josh / Christina
Apr 28 Lucas / Marcello (Final presentation for course grade)
May 12 Finals Week - no presentations
February 11, 2016
Agenda Lab outing → Casa Lopez on Monday? BMES / ASABE Undergraduate research proposal NASA Internship Project meetings Mohammadreza presentation
IMPORTANT: The Spring 2016 presentation schedule will be:
Feb 11 Mohammadreza
Feb 25 Amanda / Josh / Christina → 3d slicer / SPM12
Mar 10 Lucas / Marcello
Mar 24 Mohammadreza
Apr 14 Amanda / Josh / Christina
Apr 28 Lucas / Marcello (Final presentation for course grade)
May 12 Finals Week - no presentations